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monitor ONT sequencing from the command line because GUIs have too many pixels

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seqtop

monitor ONT sequencing from the command line

pip install seqtop

seqtop uses the MinKNOW API + plotext to give an idea how a run is going via ssh, potentially useful where connecting to MinKNOW is infeasible. Work in progress. Currently not configurable beyond update interval and options regarding the read length distribution plot.

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monitor ONT sequencing from the command line because GUIs have too many pixels

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