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Try new version of Lily's script
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aofarrel committed Jan 27, 2024
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2 changes: 1 addition & 1 deletion myco_raw.wdl
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Expand Up @@ -4,7 +4,7 @@ import "https://raw.githubusercontent.com/aofarrel/clockwork-wdl/2.12.2/tasks/co
import "https://raw.githubusercontent.com/aofarrel/clockwork-wdl/2.12.2/tasks/variant_call_one_sample.wdl" as clckwrk_var_call
import "https://raw.githubusercontent.com/aofarrel/SRANWRP/v1.1.17/tasks/processing_tasks.wdl" as sranwrp_processing
import "https://raw.githubusercontent.com/aofarrel/tree_nine/0.0.11/tree_nine.wdl" as build_treesWF
import "https://raw.githubusercontent.com/aofarrel/vcf_to_diff_wdl/0.0.1/vcf_to_diff.wdl" as diff
import "https://raw.githubusercontent.com/aofarrel/vcf_to_diff_wdl/main/vcf_to_diff.wdl" as diff
import "https://raw.githubusercontent.com/aofarrel/tb_profiler/0.2.3/tbprofiler_tasks.wdl" as profiler
import "https://raw.githubusercontent.com/aofarrel/tb_profiler/0.2.4/thiagen_tbprofiler.wdl" as tbprofilerFQ_WF # fka earlyQC
import "https://raw.githubusercontent.com/aofarrel/goleft-wdl/0.1.2/goleft_functions.wdl" as goleft
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