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Update array-to-TSV task
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aofarrel committed Aug 22, 2024
1 parent 6bf7670 commit 19ac6cf
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2 changes: 1 addition & 1 deletion myco_raw.wdl
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import "https://raw.githubusercontent.com/aofarrel/clockwork-wdl/2.12.2/tasks/combined_decontamination.wdl" as clckwrk_combonation
import "https://raw.githubusercontent.com/aofarrel/clockwork-wdl/2.12.2/tasks/variant_call_one_sample.wdl" as clckwrk_var_call
import "https://raw.githubusercontent.com/aofarrel/SRANWRP/v1.1.22/tasks/processing_tasks.wdl" as sranwrp_processing
import "https://raw.githubusercontent.com/aofarrel/SRANWRP/v1.1.24/tasks/processing_tasks.wdl" as sranwrp_processing
import "https://raw.githubusercontent.com/aofarrel/tree_nine/0.0.16/tree_nine.wdl" as build_treesWF
import "https://raw.githubusercontent.com/aofarrel/vcf_to_diff_wdl/0.0.3/vcf_to_diff.wdl" as diff
import "https://raw.githubusercontent.com/aofarrel/tb_profiler/0.2.5/tbprofiler_tasks.wdl" as profiler
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4 changes: 2 additions & 2 deletions myco_sra.wdl
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import "https://raw.githubusercontent.com/aofarrel/clockwork-wdl/2.13.0/tasks/combined_decontamination.wdl" as clckwrk_combonation
import "https://raw.githubusercontent.com/aofarrel/clockwork-wdl/2.12.2/tasks/variant_call_one_sample.wdl" as clckwrk_var_call
import "https://raw.githubusercontent.com/aofarrel/SRANWRP/v1.1.23/tasks/pull_fastqs.wdl" as sranwrp_pull
import "https://raw.githubusercontent.com/aofarrel/SRANWRP/v1.1.23/tasks/processing_tasks.wdl" as sranwrp_processing
import "https://raw.githubusercontent.com/aofarrel/SRANWRP/v1.1.24/tasks/pull_fastqs.wdl" as sranwrp_pull
import "https://raw.githubusercontent.com/aofarrel/SRANWRP/v1.1.24/tasks/processing_tasks.wdl" as sranwrp_processing
import "https://raw.githubusercontent.com/aofarrel/tree_nine/0.0.16/tree_nine.wdl" as build_treesWF
import "https://raw.githubusercontent.com/aofarrel/vcf_to_diff_wdl/0.0.3/vcf_to_diff.wdl" as diff
import "https://raw.githubusercontent.com/aofarrel/tb_profiler/0.2.5/tbprofiler_tasks.wdl" as profiler
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