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Update and revamp "myco_cleaned" (myco_simple) #40

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merged 8 commits into from
Jan 8, 2024
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@aofarrel aofarrel commented Sep 28, 2023

CDPH asked for a comparison of variants called when samples are run with and without decontamination. Seems like a good opportunity to dust off the workflow that does exactly that.

✔️make sure to update pages on dockstore accordingly
✔️make an edit to the _cleaned readmes on main linking the new versions and then set main as the default version for _cleaned*

@aofarrel aofarrel marked this pull request as ready for review January 8, 2024 19:33
@aofarrel aofarrel merged commit 2ed2e8d into main Jan 8, 2024
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@aofarrel aofarrel deleted the update-myco-cleaned branch January 8, 2024 19:41
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