Popular repositories Loading

1. fithic fithic Public

   Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.

   Python 79 16

2. mustache mustache Public

   Multi-scale Detection of Chromatin Loops from Hi-C and Micro-C Maps using Scale-Space Representation

   Python 64 11

3. dcHiC dcHiC Public

   dcHiC: Differential compartment analysis for Hi-C datasets

   R 64 10

4. FitHiChIP FitHiChIP Public

   Statistically Significant loops from HiChIP data

   R 39 20

5. ATACProc ATACProc Public

   ATAC-seq processing pipeline

   Shell 31 11

6. HiCnv HiCnv Public

   HiCnv is used to call copy number variations and breakpoints from Hi-C data

   Python 21 5