R-CMD-check

use vegan scores instead of summary due to deprecation in vegan 2.7.0 #580

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Run time

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Job	Run time
macOS-latest (release)	6m 12s
windows-latest (release)	8m 11s
ubuntu-latest (devel)	1m 15s
ubuntu-latest (release)	7m 10s
ubuntu-latest (oldrel-1)	8m 26s
ubuntu-latest (oldrel-2)	8m 21s
	39m 35s