#2427 - Import of unsplit monomers from HELM doesn't work (#2693)

epam · Dec 18, 2024 · f540156 · f540156
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diff --git a/api/tests/integration/ref/formats/helm_to_ket.py.out b/api/tests/integration/ref/formats/helm_to_ket.py.out
@@ -14,6 +14,7 @@ helm_rna_without_base.ket:SUCCEED
 helm_simple_rna.ket:SUCCEED
 helm_smiles.ket:SUCCEED
 helm_smiles_sugar.ket:SUCCEED
+helm_unsplit.ket:SUCCEED
 Test 'CHEM1{[A6OH]}|PEPTIDE1{A}$CHEM1,PEPTIDE1,1:R2-3:R1$$$V2.0': got expected error 'Polymer 'PEPTIDE1' does not contains monomer with number 3.'
 Test 'CHEM1{[A6OH]}|PEPTIDE1{A}$CHEM1,PEPTIDE1,1:R4-1:R1$$$V2.0': got expected error 'Unknown attachment point 'R4' in monomer A6OH'
 Test 'CHEM1{[A6OH]}|PEPTIDE1{A}$CHEM10,PEPTIDE1,1:R2-1:R1$$$V2.0': got expected error 'Polymer 'CHEM10' not found.'

diff --git a/api/tests/integration/tests/formats/helm_to_ket.py b/api/tests/integration/tests/formats/helm_to_ket.py
@@ -44,6 +44,7 @@ def find_diff(a, b):
     "helm_no_left_ap": "PEPTIDE1{[DACys].C}$$$$V2.0",
     "helm_fractional_ratio": "PEPTIDE1{(A:1.5+C:0.1+G:3)}$$$$V2.0",
     "helm_chem_rna_hydro": "CHEM1{[MCC]}|RNA1{R(U)P}$CHEM1,RNA1,1:pair-3:pair$$$V2.0",
+    "helm_unsplit": "RNA1{[5Br-dU]}$$$$V2.0",
 }
 
 lib = indigo.loadMonomerLibraryFromFile(