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@epiverse-trace

Epiverse-TRACE

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  1. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 43 4

  2. epiparameter epiparameter Public

    R package with library of epidemiological parameters for infectious diseases and functions and classes for working with parameters

    R 33 11

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 17 4

  4. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 16 3

  5. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 3

  6. epiCo epiCo Public

    R package for statistical and spatiotemporal modeling of epidemiological data for vector-borne diseases in Colombia

    R 12 1

Repositories

Showing 10 of 59 repositories
  • epiverse-trace.github.io Public

    Technical blog of the Epiverse-TRACE project, where we share opinions and investigations in R package development, or scientific software development more generally

    epiverse-trace/epiverse-trace.github.io’s past year of commit activity
    R 3 3 10 (1 issue needs help) 3 Updated Dec 23, 2024
  • etstats Public
    epiverse-trace/etstats’s past year of commit activity
    R 1 CC0-1.0 0 2 0 Updated Dec 23, 2024
  • cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    epiverse-trace/cfr’s past year of commit activity
    R 13 3 10 2 Updated Dec 21, 2024
  • safeframe Public

    Tagging, validating, and safeguarding data to help harden data pipelines.

    epiverse-trace/safeframe’s past year of commit activity
    R 0 0 8 4 Updated Dec 19, 2024
  • blueprints Public

    Software development blueprints for epiverse-trace

    epiverse-trace/blueprints’s past year of commit activity
    SCSS 4 4 26 (2 issues need help) 0 Updated Dec 19, 2024
  • epiparameterDB Public

    Database of epidemiological parameters

    epiverse-trace/epiparameterDB’s past year of commit activity
    R 1 CC0-1.0 1 0 3 Updated Dec 18, 2024
  • epidemics Public

    A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.

    epiverse-trace/epidemics’s past year of commit activity
    R 8 3 17 (1 issue needs help) 1 Updated Dec 18, 2024
  • etdashboard Public

    Developer dashboard for a universe overview of Epiverse-TRACE packages

    epiverse-trace/etdashboard’s past year of commit activity
    R 1 0 0 0 Updated Dec 18, 2024
  • epitkit Public
    epiverse-trace/epitkit’s past year of commit activity
    R 0 2 6 0 Updated Dec 17, 2024
  • epimodelac Public

    Training materials for the epimodelac workshop

    epiverse-trace/epimodelac’s past year of commit activity
    R 8 4 11 2 Updated Dec 17, 2024
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