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  1. funscoR funscoR Public

    R package for functionally scoring phosphorylation sites

    R 19 6

  2. ptm_hotspots ptm_hotspots Public

    Estimate PTM hotspots in protein sequence alignments

    Python 14 3

  3. ksea ksea Public

    Kinase Activity Predictions from shotgun proteomics

    R 12 1

  4. int3dInterfaces int3dInterfaces Public

    Pipeline to extract protein interfaces from Interactome3d structures

    Perl 7 4

  5. kpred kpred Public

    Uncovering phosphorylation–based specificities through functional interaction networks

    JavaScript 2 1

  6. ptmAge ptmAge Public

    Calculates the age of a PTM using ancestral reconstruction (from Romain Studer)

    Python 2 3

Repositories

Showing 10 of 16 repositories
  • ecoref Public

    An Escherichia coli genetic reference panel

    evocellnet/ecoref’s past year of commit activity
    0 0 0 0 Updated Dec 11, 2024
  • phosphocontrol Public

    Studying the structural effects of protein phosphorylation

    evocellnet/phosphocontrol’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Nov 25, 2024
  • sysbio_teaching Public

    Repository for the ETHZ Systems Biology course (FS2023)

    evocellnet/sysbio_teaching’s past year of commit activity
    Python 0 BSD-3-Clause 1 0 0 Updated May 15, 2024
  • bc_deep_learning_in_biology Public
    evocellnet/bc_deep_learning_in_biology’s past year of commit activity
    Jupyter Notebook 2 BSD-3-Clause 0 0 0 Updated Feb 27, 2024
  • kpred Public

    Uncovering phosphorylation–based specificities through functional interaction networks

    evocellnet/kpred’s past year of commit activity
    JavaScript 2 1 1 0 Updated Sep 27, 2022
  • phosfate Public

    Phosfate - Understanding human quantitative phosphoproteomics

    evocellnet/phosfate’s past year of commit activity
    JavaScript 1 GPL-3.0 0 5 0 Updated May 7, 2021
  • kinase-activity-net Public
    evocellnet/kinase-activity-net’s past year of commit activity
    R 0 1 0 0 Updated Feb 21, 2020
  • funscoR Public

    R package for functionally scoring phosphorylation sites

    evocellnet/funscoR’s past year of commit activity
    R 19 6 1 0 Updated Nov 3, 2019
  • evocellnet.github.io Public
    evocellnet/evocellnet.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 3, 2019
  • ptm_hotspots Public

    Estimate PTM hotspots in protein sequence alignments

    evocellnet/ptm_hotspots’s past year of commit activity
    Python 14 Apache-2.0 3 0 0 Updated Feb 6, 2019
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