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Update non-mono check
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joelnitta committed Aug 3, 2024
1 parent b32c6d0 commit 57ba589
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15 changes: 11 additions & 4 deletions _targets.R
Original file line number Diff line number Diff line change
Expand Up @@ -598,30 +598,37 @@ tar_plan(
# "Amauropelta",
# "Arachniodes",
# "Blechnum",
"Callistopteris",
"Crepidomanes",
# "Calochlaena",
# "Cyathea",
# "Dasygrammitis",
"Dicksonia",
# "Didymoglossum",
# "Diploblechnum",
"Dryopteridoideae",
# "Dryopteris",
"Goniopteris",
# "Lomariocycas",
# "Lytoneuron",
"Meniscium",
# "Notogrammitis",
"Olfersia",
# "Ormopteris",
# "Phanerophlebia",
# "Pneumatopteris",
# "Polybotryoideae",
"Polybotryoideae",
"Polybotrya",
# "Polypodiales",
# "Polystichum",
# "Pseudocyclosorus",
"Polystichum",
"Pseudocyclosorus",
# "Reholttumia",
"Saccoloma",
"Sceptridium",
# "Strophocaulon",
"Syngramma"
"Syngramma",
"Trichomanes",
"Xiphopterella"
# "Tomophyllum"
)
)
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3 changes: 2 additions & 1 deletion _targets/user/data_raw/non_mono_notes.csv
Original file line number Diff line number Diff line change
Expand Up @@ -42,4 +42,5 @@ Aspidotis,genus,Known paraphyletic,Revise cheilanthoids
Aleuritopteris,genus,Known paraphyletic,Revise cheilanthoids
Oeosporangium,genus,Known paraphyletic,Revise cheilanthoids
Paragymnopteris,genus,Known paraphyletic,Revise cheilanthoids
Bommeria,genus,"Rendered paraphyletic by Baja; conflicts with @George2019, who found Baja sister to remaining Bommeria",Investigate Baja relative to other Bommeria
Bommeria,genus,"Rendered paraphyletic by Baja; conflicts with @George2019, who found Baja sister to remaining Bommeria",Investigate Baja relative to other Bommeria
Ophioglossum,genus,Known paraphyletic,Rendered paraphyletic by Rhizoglossum https://github.com/pteridogroup/ppg/issues/87

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