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19 Open 35 Closed
19 Open 35 Closed
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Issues list

Height of dendrogram bubble plot dependent on number of genes in file bug Something isn't working clusters-app
#68 opened May 2, 2024 by bhavyaac
2 tasks
@bhavyaac
Heatmap not being produced bug Something isn't working clusters-app
#67 opened May 2, 2024 by bhavyaac
@bhavyaac
Solve bookmarking bug: store file input genes in variable with text input genes bug Something isn't working clusters-app
#63 opened Dec 16, 2021 by bhavyaac
@bhavyaac
Allow individual gene selection in dimensionality reduction tabs clusters-app enhancement New feature or request
#62 opened Dec 16, 2021 by bhavyaac
@bhavyaac
Add download functionality for marker tables clusters-app enhancement New feature or request
#58 opened Oct 29, 2021 by bhavyaac
@bhavyaac
Subset & visualize single cells based on gene expression thresholds clusters-app enhancement New feature or request
#53 opened Sep 9, 2021 by bhavyaac
5 tasks
@bhavyaac
Improve input validation to detect typos & synonymous genes clusters-app documentation Improvements or additions to documentation enhancement New feature or request
#51 opened Aug 2, 2021 by bhavyaac
@bhavyaac
Implement nested cell type selection in heatmap tab clusters-app enhancement New feature or request
#49 opened Jul 30, 2021 by bhavyaac
@bhavyaac
1
Handle all-zero (?) expression rescaling in heatmap bug Something isn't working clusters-app documentation Improvements or additions to documentation
#45 opened Jul 29, 2021 by bhavyaac
@bhavyaac
1
Deal with excessive table width: horizontal scroll, freeze column(s), move search box aesthetics Visual changes to existing features to improve user experience clusters-app
#40 opened Jul 12, 2021 by bhavyaac
@bhavyaac
2
Adjust alignment of the gene labels with the dendrogram bubble plots aesthetics Visual changes to existing features to improve user experience clusters-app
#39 opened Jul 12, 2021 by bhavyaac
@bhavyaac
For 2D gene plotting, fix the case when a gene has 0 expression in all samples in one region bug Something isn't working clusters-app
#35 opened Jun 26, 2021 by sjessa
@bhavyaac
4
Implement interactivity for heatmaps enhancement New feature or request grn-app
#29 opened Jun 18, 2021 by sjessa
@CooberHoo
Add searchable analyses of network/regulon changes over timecourse enhancement New feature or request grn-app priority
#24 opened Jun 18, 2021 by sjessa
@CooberHoo
Add quantification of user input gene lists within TF regulons enhancement New feature or request grn-app priority
#22 opened Jun 18, 2021 by sjessa
@CooberHoo
Plot mean expression (over selected genes) in a separate bubble plot clusters-app enhancement New feature or request priority
#18 opened Jun 16, 2021 by bhavyaac
@bhavyaac
Refactor code to use new timepoints dataset for existing app functions clusters-app priority refactor Changes to code/back end that won't alter functionality
#11 opened Jun 14, 2021 by bhavyaac
@bhavyaac
Implement more granular reactivity in joint expression tabs clusters-app refactor Changes to code/back end that won't alter functionality
#9 opened Jun 8, 2021 by bhavyaac
@bhavyaac
Explain differences between dimensionality reductions, scaling clusters-app documentation Improvements or additions to documentation grn-app
#6 opened Jun 9, 2020 by sjessa
@sjessa @bhavyaac @CooberHoo
1
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