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29 changes: 17 additions & 12 deletions docs/build.html
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<meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Build from sources &mdash; GACODE</title>
<title>Build on your laptop &mdash; GACODE</title>
<link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
<link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
<link rel="stylesheet" type="text/css" href="_static/contentui.css" />
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<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
<link rel="next" title="References" href="zreferences.html" />
<link rel="prev" title="Environment setup" href="setup.html" />
<link rel="prev" title="Prebuilt Environments" href="setup.html" />
</head>

<body class="wy-body-for-nav">
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<ul class="current">
<li class="toctree-l1"><a class="reference internal" href="license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Environment setup</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">Build from sources</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#prerequisites">Prerequisites</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">Build on your laptop</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#first-step">First step</a></li>
<li class="toctree-l2"><a class="reference internal" href="#source-code">Source code</a></li>
<li class="toctree-l2"><a class="reference internal" href="#concept-of-platform-files">Concept of platform files</a></li>
<li class="toctree-l2"><a class="reference internal" href="#environment-variables">Environment variables</a></li>
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<div role="navigation" aria-label="Page navigation">
<ul class="wy-breadcrumbs">
<li><a href="index.html" class="icon icon-home" aria-label="Home"></a></li>
<li class="breadcrumb-item active">Build from sources</li>
<li class="breadcrumb-item active">Build on your laptop</li>
<li class="wy-breadcrumbs-aside">
<a href="_sources/build.rst.txt" rel="nofollow"> View page source</a>
</li>
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<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
<div itemprop="articleBody">

<section id="build-from-sources">
<h1>Build from sources<a class="headerlink" href="#build-from-sources" title="Link to this heading"></a></h1>
<section id="prerequisites">
<h2>Prerequisites<a class="headerlink" href="#prerequisites" title="Link to this heading"></a></h2>
<p>You will need suitable python and fortran environments. There is detailed help for <a class="reference internal" href="build/pre_osx.html"><span class="doc">OSX users</span></a> and <a class="reference internal" href="build/pre_linux.html"><span class="doc">Linux users</span></a>.</p>
<section id="build-on-your-laptop">
<h1>Build on your laptop<a class="headerlink" href="#build-on-your-laptop" title="Link to this heading"></a></h1>
<section id="first-step">
<h2>First step<a class="headerlink" href="#first-step" title="Link to this heading"></a></h2>
<p>You will need suitable python and fortran environments. There is detailed help for</p>
<ul class="simple">
<li><p><a class="reference internal" href="build/pre_osx.html"><span class="doc">OSX users</span></a> (MAC M2)</p></li>
<li><p><a class="reference internal" href="build/pre_linux.html"><span class="doc">Linux users</span></a> (MINT, UBUNTU)</p></li>
</ul>
<p>If you need more help, please raise an issue at <a class="reference external" href="https://github.com/gafusion/gacode/issues">https://github.com/gafusion/gacode/issues</a></p>
</section>
<section id="source-code">
<h2>Source code<a class="headerlink" href="#source-code" title="Link to this heading"></a></h2>
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</div>
</div>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="setup.html" class="btn btn-neutral float-left" title="Environment setup" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="setup.html" class="btn btn-neutral float-left" title="Prebuilt Environments" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
<a href="zreferences.html" class="btn btn-neutral float-right" title="References" accesskey="n" rel="next">Next <span class="fa fa-arrow-circle-right" aria-hidden="true"></span></a>
</div>

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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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4 changes: 2 additions & 2 deletions docs/build/pre_osx.html
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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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4 changes: 2 additions & 2 deletions docs/cgyro.html
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<ul>
<li class="toctree-l1"><a class="reference internal" href="license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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4 changes: 2 additions & 2 deletions docs/cgyro/FAQ.html
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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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8 changes: 4 additions & 4 deletions docs/cgyro/cgyro_list.html
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<title>Alphabetical list for input.cgyro &mdash; GACODE</title>
<link rel="stylesheet" type="text/css" href="../_static/pygments.css?v=fa44fd50" />
<link rel="stylesheet" type="text/css" href="../_static/css/theme.css?v=19f00094" />
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<link rel="stylesheet" type="text/css" href="../_static/contentui.css" />


<link rel="shortcut icon" href="../_static/favicon.ico"/>
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<script src="../_static/documentation_options.js?v=5929fcd5"></script>
<script src="../_static/doctools.js?v=9a2dae69"></script>
<script src="../_static/sphinx_highlight.js?v=dc90522c"></script>
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<script src="../_static/js/theme.js"></script>
<link rel="index" title="Index" href="../genindex.html" />
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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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4 changes: 2 additions & 2 deletions docs/cgyro/cgyro_table.html
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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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4 changes: 2 additions & 2 deletions docs/cgyro/outputs.html
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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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4 changes: 2 additions & 2 deletions docs/cgyro/running_cases.html
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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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8 changes: 4 additions & 4 deletions docs/download.html
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<script src="_static/js/theme.js"></script>
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
<link rel="next" title="Environment setup" href="setup.html" />
<link rel="next" title="Prebuilt Environments" href="setup.html" />
<link rel="prev" title="GACODE License" href="license.html" />
</head>

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<li class="toctree-l2"><a class="reference internal" href="#repository-access">Repository access</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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</div>
<footer><div class="rst-footer-buttons" role="navigation" aria-label="Footer">
<a href="license.html" class="btn btn-neutral float-left" title="GACODE License" accesskey="p" rel="prev"><span class="fa fa-arrow-circle-left" aria-hidden="true"></span> Previous</a>
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<hr/>
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8 changes: 4 additions & 4 deletions docs/genindex.html
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<title>Index &mdash; GACODE</title>
<link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
<link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
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<link rel="stylesheet" type="text/css" href="_static/contentui.css" />


<link rel="shortcut icon" href="_static/favicon.ico"/>
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<script src="_static/documentation_options.js?v=5929fcd5"></script>
<script src="_static/doctools.js?v=9a2dae69"></script>
<script src="_static/sphinx_highlight.js?v=dc90522c"></script>
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<link rel="index" title="Index" href="#" />
<link rel="search" title="Search" href="search.html" />
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<ul>
<li class="toctree-l1"><a class="reference internal" href="license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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4 changes: 2 additions & 2 deletions docs/geometry.html
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<ul>
<li class="toctree-l1"><a class="reference internal" href="license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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<ul>
<li class="toctree-l1"><a class="reference internal" href="license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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<ul>
<li class="toctree-l1"><a class="reference internal" href="../license.html">GACODE License</a></li>
<li class="toctree-l1"><a class="reference internal" href="../download.html">Download and user agreement</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Environment setup</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build from sources</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Prebuilt Environments</a></li>
<li class="toctree-l1"><a class="reference internal" href="../build.html">Build on your laptop</a></li>
<li class="toctree-l1"><a class="reference internal" href="../zreferences.html">References</a></li>
</ul>
<p class="caption" role="heading"><span class="caption-text">Codes</span></p>
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