Explain hpds artifacts

uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/hpds/HPDSClient.java

@@ -2,6 +2,7 @@
 
 import com.fasterxml.jackson.core.JsonProcessingException;
 import com.fasterxml.jackson.databind.ObjectMapper;
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.Query;
 import edu.harvard.dbmi.avillach.domain.GeneralQueryRequest;
 import edu.harvard.dbmi.avillach.domain.QueryRequest;
 import org.slf4j.Logger;

uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/hpds/hpdsartifactsdonotchange/DONOTCHANGE.txt

@@ -0,0 +1,8 @@
+These files are copied directly from HPDS manually. Please only change these as you change them in HPDS.
+We're doing this rather than referencing the artifacts directly because:
+- HPDS depends on artifacts in the pic-sure repo
+- We can't make HPDS pull those artifacts from Jitpack because FISMA
+- Because HPDS relies on your m2 cache, we can't build it in Jitpack
+- So we have no way to reference the artifacts directly that doesn't lean on your m2 local
+  - Which I refuse to do. I think this is clearer.
+  - Also, that won't work well with Docker builds

uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/hpds/Filter.java → uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/hpds/hpdsartifactsdonotchange/Filter.java

@@ -1,4 +1,4 @@
-package edu.harvard.dbmi.avillach.dataupload.hpds;
+package edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange;
 
 public interface Filter<T> {
 	public boolean apply(T value);

uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/hpds/Query.java → uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/hpds/hpdsartifactsdonotchange/Query.java

@@ -1,4 +1,4 @@
-package edu.harvard.dbmi.avillach.dataupload.hpds;
+package edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange;
 
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;

uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/hpds/ResultType.java → uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/hpds/hpdsartifactsdonotchange/ResultType.java

@@ -1,4 +1,4 @@
-package edu.harvard.dbmi.avillach.dataupload.hpds;
+package edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange;
 
 public enum ResultType {
 	/**

uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/status/StatusService.java

@@ -1,6 +1,6 @@
 package edu.harvard.dbmi.avillach.dataupload.status;
 
-import edu.harvard.dbmi.avillach.dataupload.hpds.Query;
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.Query;
 import org.springframework.beans.factory.annotation.Autowired;
 import org.springframework.stereotype.Service;
 

uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/upload/DataUploadController.java

@@ -1,7 +1,7 @@
 package edu.harvard.dbmi.avillach.dataupload.upload;
 
-import edu.harvard.dbmi.avillach.dataupload.hpds.Query;
-import edu.harvard.dbmi.avillach.dataupload.hpds.ResultType;
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.Query;
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.ResultType;
 import edu.harvard.dbmi.avillach.dataupload.status.DataUploadStatuses;
 import edu.harvard.dbmi.avillach.dataupload.status.UploadStatus;
 import edu.harvard.dbmi.avillach.dataupload.status.StatusService;

uploader/src/main/java/edu/harvard/dbmi/avillach/dataupload/upload/DataUploadService.java

@@ -3,7 +3,7 @@
 import edu.harvard.dbmi.avillach.dataupload.aws.SelfRefreshingS3Client;
 import edu.harvard.dbmi.avillach.dataupload.aws.SiteAWSInfo;
 import edu.harvard.dbmi.avillach.dataupload.hpds.HPDSClient;
-import edu.harvard.dbmi.avillach.dataupload.hpds.Query;
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.Query;
 import edu.harvard.dbmi.avillach.dataupload.status.DataUploadStatuses;
 import edu.harvard.dbmi.avillach.dataupload.status.UploadStatus;
 import edu.harvard.dbmi.avillach.dataupload.status.StatusService;

uploader/src/test/java/edu/harvard/dbmi/avillach/dataupload/hpds/HPDSClientTest.java

@@ -1,5 +1,6 @@
 package edu.harvard.dbmi.avillach.dataupload.hpds;
 
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.Query;
 import org.junit.jupiter.api.Assertions;
 import org.junit.jupiter.api.Test;
 import org.mockito.InjectMocks;

uploader/src/test/java/edu/harvard/dbmi/avillach/dataupload/status/StatusRepositoryTest.java

@@ -1,6 +1,6 @@
 package edu.harvard.dbmi.avillach.dataupload.status;
 
-import edu.harvard.dbmi.avillach.dataupload.hpds.Query;
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.Query;
 import org.junit.jupiter.api.Assertions;
 import org.junit.jupiter.api.Test;
 import org.springframework.beans.factory.annotation.Autowired;

uploader/src/test/java/edu/harvard/dbmi/avillach/dataupload/status/StatusServiceTest.java

@@ -1,12 +1,11 @@
 package edu.harvard.dbmi.avillach.dataupload.status;
 
-import edu.harvard.dbmi.avillach.dataupload.hpds.Query;
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.Query;
 import org.junit.jupiter.api.Assertions;
 import org.junit.jupiter.api.Test;
 import org.mockito.InjectMocks;
 import org.mockito.Mock;
 import org.mockito.Mockito;
-import org.springframework.beans.factory.annotation.Autowired;
 import org.springframework.boot.test.context.SpringBootTest;
 
 import java.time.LocalDate;

uploader/src/test/java/edu/harvard/dbmi/avillach/dataupload/upload/DataUploadControllerTest.java

@@ -1,6 +1,6 @@
 package edu.harvard.dbmi.avillach.dataupload.upload;
 
-import edu.harvard.dbmi.avillach.dataupload.hpds.Query;
+import edu.harvard.dbmi.avillach.dataupload.hpds.hpdsartifactsdonotchange.Query;
 import edu.harvard.dbmi.avillach.dataupload.status.DataUploadStatuses;
 import edu.harvard.dbmi.avillach.dataupload.status.UploadStatus;
 import edu.harvard.dbmi.avillach.dataupload.status.StatusService;