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prefer arg rather env var #15

prefer arg rather env var

prefer arg rather env var #15

Workflow file for this run

# permissions and concurrency settings for GitHub Pages
permissions:
contents: read
pages: write
id-token: write
concurrency:
group: "pages"
cancel-in-progress: true
on: [push]
jobs:
build:
name: pkgup
environment:
name: github-pages
url: ${{ steps.deployment.outputs.page_url }}
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
- name: cache-r-dependencies
uses: actions/cache@v3
with:
path: ${{ env.R_LIBS_USER }}/*
key: library-cache-${{ github.run_id }}
restore-keys: library-cache
- name: setup-r-dependencies
run: |
Rscript -e 'stopifnot(file.copy("DESCRIPTION", file.path(tdir<-tempdir(), "PACKAGES"))); db<-available.packages(paste0("file://", tdir)); deps<-setdiff(tools::package_dependencies(read.dcf("DESCRIPTION", fields="Package")[[1L]], db, which="most")[[1L]], installed.packages(priority="high")[,"Package"]); if (length(deps)) { ap<-available.packages()[,"Version"]; ap<-ap[names(ap) %in% deps]; if (!all(deps%in%names(ap))) stop("dependencies are not avaiable in repository: ",paste(setdiff(deps, names(ap)), collapse=", ")); ip<-installed.packages()[,"Version"]; ip<-ip[names(ip) %in% deps]; pkgs<-ap[deps]>ip[deps]; install.packages(names(pkgs[pkgs|is.na(pkgs)]), INSTALL_opts="--html") }'
- name: build
run: |
R CMD build .
- name: check
run: |
R CMD check --as-cran --no-manual $(ls -1t pkgup_*.tar.gz | head -n 1)
- name: manual
if: github.ref == 'refs/heads/master'
run: |
cp -R ${{ env.R_LIBS_USER }} library
R CMD INSTALL --library="library" $(ls -1t pkgup_*.tar.gz | head -n 1) --html
mkdir -p doc/html
cp /usr/share/R/doc/html/{left.jpg,up.jpg,Rlogo.svg,R.css,index.html} doc/html
Rscript -e 'utils::make.packages.html("library", docdir="doc")'
sed -i "s|file://|../..|g" doc/html/packages.html
mkdir -p public
mv doc public/doc
cp -r --parents library/*/{html,help,doc,demo,DESCRIPTION,README,NEWS,README.md,NEWS.md} public 2>/dev/null || :
sed -i 's|"/doc/html/|"/pkgup/doc/html/|g' public/library/pkgup/doc/index.html 2>/dev/null || :
echo '<!DOCTYPE html>\n<html><head><meta http-equiv="refresh" content="0; url=library/pkgup/html/00Index.html"><title>HTTP redirect</title></head><body></body></html>' > public/index.html
- name: repo
if: github.ref == 'refs/heads/master'
run: |
mkdir -p public/src/contrib
mv $(ls -1t pkgup_*.tar.gz | head -n 1) public/src/contrib
Rscript -e 'tools::write_PACKAGES("public/src/contrib")'
- name: upload
if: github.ref == 'refs/heads/master'
uses: actions/upload-pages-artifact@v1
with:
path: "public"
- name: deploy
if: github.ref == 'refs/heads/master'
id: deployment
uses: actions/deploy-pages@v1