prepared for clone repo

luissian · Oct 8, 2024 · 2f8304a · 2f8304a
1 parent ca416cf
commit 2f8304a
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Showing 6 changed files with 750 additions and 22 deletions.
diff --git a/core/utils/samples.py b/core/utils/samples.py
@@ -922,7 +922,7 @@ def get_all_sample_information(sample_id, join_values=False):
                                 .last()
                                 .get_param_value()
                             )
-                        except core.models.MoleculeParameterValue.DoesNotExist:
+                        except (core.models.MoleculeParameterValue.DoesNotExist, AttributeError):
                             # if the parameter was not set at the time the molecule was handeled
                             mol_param_value.append("")
 

diff --git a/wetlab/class_views/handling_fragmentation.py b/wetlab/class_views/handling_fragmentation.py
@@ -0,0 +1,23 @@
+from django.shortcuts import render
+from django.views import View
+import core.models
+import core.core_config
+import core.utils.samples
+
+class HandlingFragmentation(View):
+    template_name = "wetlab/hamdling_fragmentation.html"
+    package = __package__.split(".")[0]
+
+    def get(self, request, *args, **kwargs):
+        # collect the data to be shown in the form
+        return render(request, self.template_name, {"fragmentation_data": self.get_fragmentation_data})
+
+    def post(self, request, *args, **kwargs):
+
+
+        pass
+
+
+    def get_fragmentation_data(self):
+        # get the data to be shown in the form
+        pass
diff --git a/wetlab/templates/wetlab/display_sample.html b/wetlab/templates/wetlab/display_sample.html
@@ -225,26 +225,28 @@ <h3 class="text-center">Sample information for {{sample_information.sample_name}
                                                     </div>
                                                 </div>
                                                 {% if lib_param_heading is not None %}
-                                                    <div class="col">
-                                                        <div class="card ">
-                                                            <div class="card-header"><h4>Quality Parameter Library Preparation Information</h4></div>
-                                                            <div class="card-body">
-                                                                <table class="table table-hover">
-                                                                    <thead>
-                                                                        <tr>
-                                                                            {% for lib_par_head in lib_param_heading %}
-                                                                                <th>{{ lib_par_head }} </th>
-                                                                            {%endfor%}
-                                                                        </tr>
-                                                                    </thead>
-                                                                    <tbody>
-                                                                        <tr>
-                                                                            {% for value in lib_param_values %}
-                                                                                <td>{{ value }} </td>
-                                                                            {%endfor%}
-                                                                        </tr>
-                                                                    </tbody>
-                                                                </table>
+                                                    <div class="row horizontal-scroll">
+                                                        <div class="col">
+                                                            <div class="card ">
+                                                                <div class="card-header"><h4>Quality Parameter Library Preparation Information</h4></div>
+                                                                <div class="card-body">
+                                                                    <table class="table table-hover">
+                                                                        <thead>
+                                                                            <tr>
+                                                                                {% for lib_par_head in lib_param_heading %}
+                                                                                    <th>{{ lib_par_head }} </th>
+                                                                                {%endfor%}
+                                                                            </tr>
+                                                                        </thead>
+                                                                        <tbody>
+                                                                            <tr>
+                                                                                {% for value in lib_param_values %}
+                                                                                    <td>{{ value }} </td>
+                                                                                {%endfor%}
+                                                                            </tr>
+                                                                        </tbody>
+                                                                    </table>
+                                                                </div>
                                                             </div>
                                                         </div>
                                                     </div>