Add hierarchy_node to binary github tests

ncbi · Oct 16, 2023 · eb7ec06 · eb7ec06
1 parent 01dbead
commit eb7ec06
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/.github/workflows/binary.yml b/.github/workflows/binary.yml
@@ -23,11 +23,11 @@ jobs:
           run: ./amrfinder --database_version
         - name: run tests included with distribution
           run: |
-              ./amrfinder --plus -p test_prot.fa -g test_prot.gff -O Escherichia > test_prot.got
+              ./amrfinder --plus -p test_prot.fa -g test_prot.gff -O Escherichia --hierarchy_node > test_prot.got
               diff test_prot.expected test_prot.got
-              ./amrfinder --plus -n test_dna.fa -O Escherichia --mutation_all test_dna_mut_all.got > test_dna.got
+              ./amrfinder --plus -n test_dna.fa -O Escherichia --mutation_all test_dna_mut_all.got --hierarchy_node > test_dna.got
               diff test_dna.expected test_dna.got
-              ./amrfinder --plus -n test_dna.fa -p test_prot.fa -g test_prot.gff -O Escherichia > test_both.got
+              ./amrfinder --plus -n test_dna.fa -p test_prot.fa -g test_prot.gff -O Escherichia --hierarchy_node > test_both.got
               diff test_both.expected test_both.got
         - name: Run tests
           run: |