Support pandas v2 #2991

Job	Run time
check-docs	33s
pathogen-repo-ci (dengue)	2m 50s
mypy	47s
pathogen-repo-ci (lassa)	44s
pathogen-repo-ci (measles)	1m 30s
pathogen-repo-ci-v0 (avian-flu)	53s
pyright	14s
pathogen-repo-ci-v0 (ebola)	55s
test (python=3.8 biopython=1.80)	5m 58s
pathogen-repo-ci (mpox)	1m 24s
pathogen-repo-ci-v0 (mumps)	1m 1s
test (python=3.8 biopython=latest)	5m 43s
pathogen-repo-ci (seasonal-cov)	1m 56s
pathogen-repo-ci-v0 (ncov)	1m 5s
test (python=3.9 biopython=1.80)	6m 10s
pathogen-repo-ci (zika)	57s
pathogen-repo-ci-v0 (rsv)	8m 45s
test (python=3.9 biopython=latest)	6m 19s
pathogen-repo-ci-v0 (seasonal-flu)	1m 15s
test (python=3.10 biopython=1.80)	6m 0s
pathogen-repo-ci-v0 (tb)	1m 14s
test (python=3.10 biopython=latest)	6m 3s
test (python=3.11 biopython=1.80)	6m 18s
test (python=3.11 biopython=latest)	6m 9s
build-docs / build	2m 3s
codecov	14s
release	0s
rebuild-docker-image	0s
	1h 17m 0s

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