feat(ancestral): Add optional Nextclade GFF3 compatibility mode #3000

Job	Run time
pyright	24s
mypy	55s
check-docs	33s
pathogen-repo-ci (dengue)	3m 3s
pathogen-repo-ci-v0 (avian-flu)	57s
pathogen-repo-ci (lassa)	52s
test (python=3.8 biopython=1.80)	11m 22s
pathogen-repo-ci-v0 (ebola)	52s
pathogen-repo-ci (measles)	1m 23s
test (python=3.8 biopython=latest)	11m 43s
pathogen-repo-ci-v0 (mumps)	1m 3s
pathogen-repo-ci (mpox)	1m 13s
test (python=3.9 biopython=1.80)	12m 50s
pathogen-repo-ci-v0 (ncov)	58s
pathogen-repo-ci (seasonal-cov)	1m 46s
pathogen-repo-ci-v0 (rsv)	8m 42s
test (python=3.9 biopython=latest)	12m 43s
pathogen-repo-ci (zika)	55s
pathogen-repo-ci-v0 (seasonal-flu)	1m 21s
test (python=3.10 biopython=1.80)	12m 31s
pathogen-repo-ci-v0 (tb)	1m 14s
test (python=3.10 biopython=latest)	12m 6s
test (python=3.11 biopython=1.80)	12m 42s
test (python=3.11 biopython=latest)	12m 10s
build-docs / build	2m 5s
codecov	17s
release	0s
rebuild-docker-image	0s
	2h 6m 40s

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