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fix: upper case root sequence for ancestral reconstruction #3004

fix: upper case root sequence for ancestral reconstruction

fix: upper case root sequence for ancestral reconstruction #3004

Triggered via pull request November 10, 2024 20:08
Status Success
Total duration 14m 9s
Artifacts 14

ci.yaml

on: pull_request
Matrix: pytest-cram
Matrix: pathogen-repo-ci-v0
Matrix: pathogen-repo-ci
rebuild-docker-image
0s
rebuild-docker-image
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1 error and 5 warnings
pathogen-repo-ci-v0 (lassa)
Process completed with exit code 1.
pyright
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
pathogen-repo-ci-v0 (lassa)
No files were found with the provided path: ./pathogen-repo/auspice/ ./pathogen-repo/results/ ./pathogen-repo/benchmarks/ ./pathogen-repo/logs/ ./pathogen-repo/.snakemake/log/. No artifacts will be uploaded.
check-docs
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
mypy
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
codecov
The `python-version` input is not set. The version of Python currently in `PATH` will be used.

Artifacts

Produced during runtime
Name Size
coverage
166 KB
output-avian-flu
96.7 KB
output-dengue
1.31 MB
output-ebola
112 KB
output-lassa
322 KB
output-measles
3.88 MB
output-mpox
12.7 MB
output-mumps
339 KB
output-ncov
712 KB
output-rsv
9.45 MB
output-seasonal-cov
1.54 MB
output-seasonal-flu
51.4 KB
output-tb
5.02 MB
output-zika
749 KB