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Issues list

missing expected files causes pipeline to fail
#49 opened Dec 18, 2024 by dmoracze
run_afni_refacer inconsistent variable names bug Something isn't working
#48 opened Dec 11, 2024 by dmoracze
@dmoracze
environment.yml points to a specific user's location. Needs to be more general
#47 opened Dec 11, 2024 by dmoracze
Add --mode derivative,inplace option
#46 opened Jun 9, 2024 by yarikoptic
Should exit with non-0 exit code in case of failing, and likely even upon initial fail to run AFNI / fsl tools
#45 opened May 21, 2024 by yarikoptic
1
Should just skip a subject without anatomical
#44 opened May 21, 2024 by yarikoptic
Should not look under non-bids folders, or in particular under folder names with leading period
#43 opened May 21, 2024 by yarikoptic
Blows up with KeyError: 'ses-02' whenever that subject does not have T1w in any other session but one
#42 opened May 21, 2024 by yarikoptic
Reduce environment size
#36 opened May 26, 2023 by dmoracze
1
Generate modality specific 3D renders enhancement New feature or request low priority
#25 opened Apr 19, 2023 by Arshitha
Turn into Docker container for BIDS App enhancement New feature or request medium priority
#24 opened Apr 17, 2023 by ericearl
@ericearl
1
Use python logging module instead of print statements to control verbosity enhancement New feature or request low priority
#23 opened Apr 17, 2023 by ericearl
@Arshitha
Add progress bar while defacing is in progress enhancement New feature or request low priority
#19 opened Mar 25, 2023 by Arshitha
@Arshitha
1
Replace FSL commands with AFNI equivalents enhancement New feature or request medium priority
#18 opened Mar 25, 2023 by Arshitha
@Arshitha
Add docstrings for functions in deface.py and register.py documentation Improvements or additions to documentation low priority
#14 opened Nov 2, 2022 by Arshitha Version 0.0.1
@Arshitha
Flesh out the QC workflow, in text and sample images documentation Improvements or additions to documentation medium priority
#9 opened Oct 12, 2022 by dmoracze Version 0.0.1
@Arshitha
ProTip! Follow long discussions with comments:>50.