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Test

Test #602

Workflow file for this run

name: Test
on:
pull_request:
push:
schedule:
# run weekly to ensure that we are still good
- cron: '1 2 * * 3'
jobs:
test:
runs-on: ubuntu-latest
env:
BOTO_CONFIG: /tmp/nowhere
DATALAD_TESTS_SSH: '1'
strategy:
fail-fast: false
matrix:
python-version:
- '3.9'
- '3.10'
- '3.11'
- '3.12'
# Seems needs work in traits: https://github.com/nipy/heudiconv/pull/799#issuecomment-2447298795
# - '3.13'
steps:
- name: Check out repository
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install git-annex
run: |
# The ultimate one-liner setup for NeuroDebian repository
bash <(wget -q -O- http://neuro.debian.net/_files/neurodebian-travis.sh)
sudo apt-get update -qq
sudo apt-get install git-annex-standalone dcm2niix
- name: Install dependencies
run: |
python -m pip install --upgrade pip wheel
pip install -r dev-requirements.txt
pip install requests # below installs pyld but that assumes we have requests already
pip install datalad
pip install coverage pytest
- name: Configure Git identity
run: |
git config --global user.email "[email protected]"
git config --global user.name "GitHub Almighty"
- name: Run tests with coverage
run: coverage run `which pytest` -s -v heudiconv
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v5
with:
fail_ci_if_error: false
token: ${{ secrets.CODECOV_TOKEN }}
# vim:set et sts=2: