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    75 repositories

    • datajoint-utilities

      Public
      A general purpose repository containing all generic tools/utilities surrounding the DataJoint ecosystem. These can be candidates for DataJoint plugins
      Python
      •
      MIT License
      •9•4•3•0•Updated Nov 15, 2024Nov 15, 2024

    • PosePipeline

      Public
      PosePipe is a human pose estimation (HPE) pipeline to facilitate home movement analysis from videos
      Python
      •
      GNU General Public License v3.0
      •14•0•0•0•Updated Oct 15, 2024Oct 15, 2024

    • sciops-dev_sabatini

      Public
      Jupyter Notebook
      •
      MIT License
      •26•0•0•0•Updated Apr 23, 2024Apr 23, 2024

    • pam-oauth2

      Public
      A Pluggable Authentication Module (PAM) for MySQL that allows authentication against a central OIDC provider.
      Rust
      •4•2•0•1•Updated Feb 23, 2024Feb 23, 2024

    • db-programming-with-datajoint

      Public
      A series of notebooks accompanying video tutorials
      Jupyter Notebook
      •
      GNU Lesser General Public License v3.0
      •6•1•0•2•Updated Feb 22, 2024Feb 22, 2024

    • docker-registry

      Public
      Shell
      •1•1•0•0•Updated Dec 4, 2023Dec 4, 2023

    • map-ephys

      Public
      Mesoscale activity ephys ingest schema
      Jupyter Notebook
      •
      MIT License
      •31•1•4•0•Updated Oct 12, 2023Oct 12, 2023

    • ArsenyLab_DJ_cloud

      Public
      Python
      •3•0•0•0•Updated Sep 25, 2023Sep 25, 2023

    • datajoint-tutorials

      Public
      Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples
      Jupyter Notebook
      •124•0•0•0•Updated Mar 23, 2023Mar 23, 2023

    • workflow-calcium-imaging

      Public archive
      Example DataJoint workflow for multi-photon calcium imaging analysis with CaImAn and Suite2p
      Python
      •
      MIT License
      •27•0•0•0•Updated Mar 22, 2023Mar 22, 2023

    • workflow-array-ephys

      Public template
      Example DataJoint workflow for Neuropixels analysis with Kilosort
      Jupyter Notebook
      •
      MIT License
      •23•0•0•0•Updated Mar 22, 2023Mar 22, 2023

    • monkey-dj

      Public
      firefly-monkey datajoint schema
      Jupyter Notebook
      •
      MIT License
      •2•0•0•0•Updated Feb 14, 2023Feb 14, 2023

    • point-cloud-registration

      Public
      Point Cloud Registration
      Jupyter Notebook
      •
      MIT License
      •6•0•0•0•Updated Feb 12, 2023Feb 12, 2023

    • FinkelsteinLab_DJ_cloud

      Public archive
      DJ on cloud
      Python
      •2•0•0•0•Updated Jan 4, 2023Jan 4, 2023

    • IBL-pipeline

      Public
      DataJoint pipeline for IBL project
      Jupyter Notebook
      •32•0•4•1•Updated Dec 15, 2022Dec 15, 2022

    • DJ-NWB-Hires-Gutnisky-2015

      Public
      Data pipeline for Hires, Gutnisky, et al., 2015
      Jupyter Notebook
      •
      MIT License
      •1•0•0•5•Updated Dec 8, 2022Dec 8, 2022

    • DJ-NWB-Inagaki-2018-2019

      Public
      DataJoint pipeline and NWB conversion for Inagaki-2018 paper
      Jupyter Notebook
      •
      MIT License
      •1•0•0•3•Updated Dec 8, 2022Dec 8, 2022

    • DJ-NWB-Economo-2018

      Public
      DataJoint-NWB conversion project for Economo et al., 2018 paper
      Jupyter Notebook
      •
      MIT License
      •2•1•0•3•Updated Dec 8, 2022Dec 8, 2022

    • DJ-NWB-Li-Daie-2015-2016

      Public
      DataJoint-NWB conversion project for Li et al., 2015 and Li, Daie, et al., 2016 paper
      Jupyter Notebook
      •
      MIT License
      •5•0•4•5•Updated Dec 8, 2022Dec 8, 2022

    • DJ-NWB-Guo-Inagaki-2017

      Public
      Data Joint data pipeline and NWB conversion for Guo, Inagaki et al., 2017 paper
      Jupyter Notebook
      •
      MIT License
      •3•0•0•5•Updated Dec 8, 2022Dec 8, 2022

    • RecordingProcessJobGUI

      Public
      GUI to register recordings in the automatic pipeline
      Python
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Oct 12, 2022Oct 12, 2022

    • dbbak

      Public
      MySQL database backup scripting
      Shell
      •
      MIT License
      •5•0•0•0•Updated Sep 21, 2022Sep 21, 2022

    • adamacs

      Public
      Architectures for data management and computational support. This is the central database architecture for the collaborative research center of the SFB1089.
      Jupyter Notebook
      •
      MIT License
      •5•1•0•0•Updated Sep 15, 2022Sep 15, 2022

    • BrainCogsEphysSorters

      Public
      Compilation of electrophysiology sorters supported in the U19 Ephys Pipeline
      HTML
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Sep 14, 2022Sep 14, 2022

    • U19-pipeline_python

      Public
      The python data pipeline defined with DataJoint for U19 projects
      Jupyter Notebook
      •14•0•0•0•Updated Aug 11, 2022Aug 11, 2022

    • pointmatch

      Public
      MIT License
      •0•0•0•0•Updated Jul 25, 2022Jul 25, 2022

    • dj-cookiecutter

      Public
      DataJoint cookiecutter made for SciOps element and workflow development
      cookiecutterdatajoint-sciops
      Python
      •
      MIT License
      •2•1•0•0•Updated Jul 20, 2022Jul 20, 2022

    • ibl-navigator

      Public
      Web application for navigating the IBL pipeline. Deployments specification located in https://github.com/datajoint-company/ibl-gitops.
      JavaScript
      •
      MIT License
      •7•1•13•1•Updated Jun 29, 2022Jun 29, 2022

    • neurophotonics

      Public
      simulation of light
      Jupyter Notebook
      •6•2•2•0•Updated Jun 15, 2022Jun 15, 2022

    • k8s-admin-docker

      Public
      Shell
      •3•1•0•2•Updated May 17, 2022May 17, 2022