fix show(),cc

rformassspectrometry · Mar 19, 2024 · dddc179 · dddc179
1 parent b0dc449
commit dddc179
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: PSMatch
 Title: Handling and Managing Peptide Spectrum Matches
-Version: 1.7.1
+Version: 1.7.2
 Authors@R:
    c(person(given = "Laurent", family = "Gatto",
             email = "[email protected]",

diff --git a/NEWS.md b/NEWS.md
@@ -1,5 +1,9 @@
 # PSMatch 1.7
 
+## PSMatch 1.7.2
+
+- Fix connected component dim names in `show()`.
+
 ## PSMatch 1.7.1
 
 - In `addFragments()` use `...` to pass parameters to

diff --git a/R/ConnectedComponent-class.R b/R/ConnectedComponent-class.R
@@ -210,7 +210,7 @@ setMethod("show", "ConnectedComponents",
               cat(sprintf("An instance of class %s", class(object)), "\n")
               cat(" Number of proteins:", nrow(ccMatrix(object)), "\n")
               cat(" Number of components:", length(connectedComponents(object)), "\n")
-              cat(" Number of components [peptide x peptides]:\n  ")
+              cat(" Number of components [peptide x proteins]:\n  ")
               dim_mat <- dims(object)
               cat(paste0(sum(dim_mat[, 1] == 1 & dim_mat[, 2] == 1), "[1 x 1] "))
               cat(paste0(sum(dim_mat[, 1] == 1 & dim_mat[, 2] > 1), "[1 x n] "))