[r] Backport resume-mode for R to the release-1.10 branch, and R 1.…

…10.2 (#2490) * Backport resume-mode for R to the `release-1.10` branch * apis/r/NEWS.md --------- Co-authored-by: Paul Hoffman <[email protected]>
single-cell-data · Apr 29, 2024 · b1f7fd5 · b1f7fd5
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diff --git a/apis/r/DESCRIPTION b/apis/r/DESCRIPTION
@@ -6,7 +6,7 @@ Description: Interface for working with 'TileDB'-based Stack of Matrices,
     like those commonly used for single cell data analysis. It is documented at
     <https://github.com/single-cell-data>; a formal specification available is at
     <https://github.com/single-cell-data/SOMA/blob/main/abstract_specification.md>.
-Version: 1.10.1
+Version: 1.10.2
 Authors@R: c(
     person(given = "Aaron", family = "Wolen",
            role = c("cre", "aut"), email = "[email protected]",

diff --git a/apis/r/NAMESPACE b/apis/r/NAMESPACE
@@ -2,6 +2,8 @@
 
 S3method("[[",MappingBase)
 S3method("[[<-",MappingBase)
+S3method(.read_soma_joinids,SOMADataFrame)
+S3method(.read_soma_joinids,SOMASparseNDArray)
 S3method(as.list,CoordsStrider)
 S3method(as.list,MappingBase)
 S3method(iterators::nextElem,CoordsStrider)

diff --git a/apis/r/NEWS.md b/apis/r/NEWS.md
@@ -1,3 +1,7 @@
+# 1.10.2
+
+* Port resume-ingest mode from Python to R
+
 # 1.10.1
 
 * This release contains a single Python-only bug fix
@@ -11,6 +15,7 @@
 * Add support for reading `*m` and `*p` layers from `SOMAExperimentAxisQuery`
 * Add support for blockwise iteration
 * Make `reopen()` a public method for all `TileDBObjects`
+* Add support for resume-mode in `write_soma()`
 
 # 1.7.0