docs: fix incorrect compare URL (#234) #377
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: python_poetry_package | |
| on: | |
| push: | |
| branches: [ master, dev ] | |
| pull_request: | |
| branches: [ master, dev ] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| python-version: [ 3.8, 3.9, "3.10", "3.11", "3.12" ] | |
| os: [ ubuntu-latest, macos-latest ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install and configure Poetry | |
| uses: snok/install-poetry@v1 | |
| - name: Install dependencies | |
| run: make install-ci | |
| - name: Check formatting with black and isort | |
| run: make check-fmt | |
| - name: Lint with flake8 | |
| run: make lint | |
| - name: Test and generate coverage report with pytest | |
| run: | | |
| # have to do this as use of tmpdir in tests changes directory | |
| covg_report="$(pwd)/coverage.xml" | |
| poetry run pytest --cov=snakefmt --cov-report=xml:$covg_report --cov-branch tests/ | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| files: ./coverage.xml | |
| flags: unittests |