thiagosantos1

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Thiago thiagosantos1

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Emory University
Atlanta
linkedin.com/in/thiagosantos-cs/

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thiagosantos1/README.md

Hi there, I'm Thiago Santos 👋

I am an Artificial Intelligence Engineer at Mendel AI

🔭 I am currently working on the intersection of multi-model and multi-data, as well as how to integrate them together in order to improve information extraction from heterogeneous medical records.
⌛ My work interest is on information extraction from heterogeneous medical sources (pathology reports, clinical notes, radiology reports, lab results, and many others)
⚡ Fun facts: I love video games 🎮, biking 🚲, soccer ⚽, cooking 🍜 and a scotch whisky 🥃

Languages and Tools:

👨🏻‍🔬 Scientific Publications

Published:

Thiago Santos, Amara Tariq, Susmita Das, Kavyasree Vayalpati, Geoffrey H. Smith, Hari Trivedi, and Imon Banerjee. "PathologyBERT - Pre-trained Vs. A New Transformer Language Model for Pathology Domain" American Medical Informatics Association (AMIA) Annual Symposium (2022)
Thiago Santos, Amara Tariq, Judy Wawira Gichoya, Hari Trivedi, and Imon Banerjee. "Automatic Classification of Cancer Pathology Reports: A Systematic Review" Journal of Pathology Informatics (JPI)(2022)
Thiago Santos, Rishav Dhar, Amara Tariq, Elizabeth Anne Krupinski, Erin E Grady, and Imon Banerjee. "An Auto-mated NLP Tool to Rank Applications for Diagnostic Radiology Residency: Utility for Understanding Elements Associatedwith Selection for Interview" Under Revision
Thiago Santos "A deep hierarquical framework for automatic extraction of cancer diagnosis and severity " Work In Progress
Thiago Santos "An end-to-end Multi-Task BERT for automatic extraction of cancer diagnosis and severity " Work In Progress
Thiago Santos, Omar Kallas, Janice Newsome, Daniel Rubin,Judy Gichoya,and Imon Banerjee."A Fusion NLP Modelfor the Inference of Standardized Thyroid Nodule Malignancy Scores from Radiology Report Text" American Medical Informatics Association (AMIA) Annual Symposium (2021)
Akbar R., Arash R., and Thiago Santos. "Toward a Dichotomy for Approximation of H-Coloring" ICALP 2019

Book Chapters:

Amara Tariq,Thiago Santos, and Imon Banerjee. "A Survey of Natural Language Processing Methods and Tools in Cardiology" Artificial Intelligence in Cardiothoracic Imaging, Spring Nature (2021)
Susmita Das, Amara Tariq,Thiago Santos, Sai Sandeep Kantareddy, and Imon Banerjee. "Recurrent neural networks(RNN) - architectures, training tricks and introduction to influential research" To appear in O. Colliot (Ed.),Machine Learning for Brain Disorders, Springer (2022)

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HCSBC HCSBC Public

HCSBC: Hierarchical Classification System for Breast Cancer Specimen Report

Python 4 1
Residency_AI Residency_AI Public

Python 1
TIRADS-Inference TIRADS-Inference Public

Python 2
Approximation_Min_Cost_Homomorphism Approximation_Min_Cost_Homomorphism Public

designing a constant ap- proximation algorithm for minimum cost homomorphism.

MATLAB 1 1
Maltsev_Homomorphism Maltsev_Homomorphism Public

Digraphs Homomorphism Problems with Maltsev Condition

C 1 2
Phylogeny_Operations_CUDA Phylogeny_Operations_CUDA Public

phylogeny operations, using parallel program(C, C++ and CUDA) to speed up the process

Cuda 1