MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
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Aug 26, 2024 - Jupyter Notebook
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mimic-iii
Here are 104 public repositories matching this topic...
BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences
natural-language-processing word-embeddings pubmed fasttext mimic-iii bionlp sentence-similarity sentence-embeddings sent2vec
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Aug 15, 2023 - Jupyter Notebook
BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
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Mar 25, 2023 - Python
Mapping the MIMIC-III database to the OMOP schema
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Mar 17, 2024 - PLpgSQL
Toolkit for evaluating and monitoring AI models in clinical settings
machine-learning deep-learning evaluation healthcare physionet mimic-iii electronic-health-record clinical-research eicu-crd clinical-data clinical-decision-support drift-detection model-monitoring data-drift omop-cdm mimic-iv electronic-medical-record
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Dec 23, 2024 - Python
IJCAI2021: Code for SafeDrug, MIMIC data processing, Medical code mapping
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Aug 1, 2023 - Python
🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datasets, cohorts, prediction tasks, endpoints, preprocessing, and models. Paper: https://arxiv.org/abs/2306.05109
benchmark machine-learning framework deep-learning time-series icu ehr mimic-iii eicu-crd clinical-data patient-monitoring mimic-iv hirid-dataset amsterdamumcdb clinical-ml
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Dec 20, 2024 - Python
Transthoracic echocardiography and mortality in sepsis: analysis of the MIMIC-III database
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Jun 1, 2021 - Jupyter Notebook
A python package for removing duplicate text in clinical notes or other documents
text-mining fda text-analysis python3 python-3 text-processing mimic-iii nlp-resources mimic plagarism plagiarism-evaluation
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Aug 6, 2020 - TeX
OMOP standardization pipeline for ICU databases
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Jul 3, 2024 - Python
Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model
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Dec 17, 2017 - Jupyter Notebook
Code for the paper: Multi-Label Clinical Time-Series Generation via Conditional GAN (IEEE TKDE)
time-series generative-adversarial-network gan ehr mimic-iii imbalanced-data electronic-health-records conditional-gan mimic-iv
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Jul 5, 2022 - Python
Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction
deep-learning convolutional-neural-networks clinical-notes mimic-iii mortality-prediction multi-task-prediction
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Jul 26, 2019 - Python
Rare disease identification from free-text clinical notes with ontologies and weak supervision
ontology weak-supervision clinical-notes mimic-iii ontology-matching umls entity-linking rare-disease ordo discharge-summaries
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May 6, 2023 - Python
Prediction of ICU Readmissions Using Data at Patient Discharge using MIMICIII Database
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May 7, 2021 - Python
[arXiv'24] The official implementation code of LEADER.
healthcare recommender-system mimic-iii mimic mimic-iv large-language-models medication-recommendation
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Aug 31, 2024 - Python
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