MACS -- Model-based Analysis of ChIP-Seq
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Nov 30, 2024 - Python
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peak-caller
Here are 11 public repositories matching this topic...
HMMRATAC peak caller for ATAC-seq data
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Nov 12, 2024 - Java
(DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER
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Nov 21, 2018 - Python
CLIP-seq Analysis of Multi-mapped reads
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Jul 20, 2021 - Python
Improving the feature density based peak caller with dynamic statistics
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Oct 23, 2024 - Python
Robust Open Chromatin Detection via Convex Optimization: Multisample Consensus Peak Calling
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Nov 12, 2024 - Python
Automatically exported from code.google.com/p/zinba
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Apr 6, 2017 - C
Sequencing data preprocessing
mapping ngs sequencing entrez bigwig chip-seq peak-caller wiggle galaxy-project fastq bedtools ncbi samtools sra ucsc-browser bowtie2 chip-seq-pipelines galaxy-server macs2 bedfile
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Jun 18, 2018 - R
Web-based tool to systematically analyze and correct reference minor alleles in variant calling data
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Jun 17, 2017 - HTML
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