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update docker commands
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LiNk-NY committed Dec 18, 2023
1 parent 6537d42 commit a8a29a2
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4 changes: 2 additions & 2 deletions DESCRIPTION
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Expand Up @@ -52,7 +52,7 @@ License: Artistic-2.0
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
URL: https://waldronlab.github.io/MultiAssayWorkshop/,
docker.io/mr148/multiassayworkshop
ghcr.io/waldronlab/multiassayworkshop
BugReports: https://github.com/waldronlab/MultiAssayWorkshop/issues/new
VignetteBuilder: knitr
DockerImage: docker.io/mr148/multiassayworkshop:latest
DockerImage: ghcr.io/waldronlab/multiassayworkshop:latest
15 changes: 15 additions & 0 deletions README.md
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Expand Up @@ -77,6 +77,21 @@ the `curatedTCGAData` and `cBioPortalData` packages.
| Creating and importing TCGA multi-assay datasets | 10m |
| Subsetting and reshaping multi-assay data | 10m |

## Docker Commands for Workshop

The Docker image for this workshop is available on the GitHub Container
Registry. Pull (download) the image with the following command:

```
docker pull ghcr.io/waldronlab/multiassayworkshop:latest
```

Run the workshop with Docker by using the following command:

```
docker run -e PASSWORD=bioc -p 8787:8787 ghcr.io/waldronlab/multiassayworkshop:latest
```

## Workshop goals and objectives

### Learning goals
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2 changes: 1 addition & 1 deletion vignettes/Ramos_MultiAssayExperiment.Rmd
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Expand Up @@ -57,7 +57,7 @@ opts_chunk$set(out.width="100%", cache=TRUE)
* Docker users can run this workshop locally via:

```
docker run -e PASSWORD=bioc -p 8787:8787 mr148/multiassayworkshop:latest
docker run -e PASSWORD=bioc -p 8787:8787 ghcr.io/waldronlab/multiassayworkshop:latest
```

## Requirements: R/Bioconductor packages
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