Bump versions for noodles 0.86.0

zaeleus · Dec 12, 2024 · 901525b · 901525b
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diff --git a/noodles-bam/CHANGELOG.md b/noodles-bam/CHANGELOG.md
@@ -1,6 +1,6 @@
 # Changelog
 
-## Unreleased
+## 0.71.0 - 2024-12-12
 
 ### Changed
 

diff --git a/noodles-bam/Cargo.toml b/noodles-bam/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-bam"
-version = "0.70.0"
+version = "0.71.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -21,14 +21,14 @@ indexmap.workspace = true
 memchr.workspace = true
 tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }
 
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.40.0" }
-noodles-sam = { path = "../noodles-sam", version = "0.66.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.41.0" }
+noodles-sam = { path = "../noodles-sam", version = "0.67.0" }
 
 [dev-dependencies]
 flate2.workspace = true
-noodles-sam = { path = "../noodles-sam", version = "0.66.0", features = ["async"] }
+noodles-sam = { path = "../noodles-sam", version = "0.67.0", features = ["async"] }
 tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] }
 
 [package.metadata.docs.rs]

diff --git a/noodles-bcf/CHANGELOG.md b/noodles-bcf/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.65.0 - 2024-12-12
+
+### Changed
+
+  * bcf: Sync dependencies.
+
 ## 0.64.0 - 2024-11-07
 
 ### Changed

diff --git a/noodles-bcf/Cargo.toml b/noodles-bcf/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-bcf"
-version = "0.64.0"
+version = "0.65.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -16,10 +16,10 @@ async = ["dep:futures", "dep:tokio", "noodles-bgzf/async", "noodles-csi/async",
 [dependencies]
 byteorder.workspace = true
 indexmap.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.40.0" }
-noodles-vcf = { path = "../noodles-vcf", version = "0.68.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.41.0" }
+noodles-vcf = { path = "../noodles-vcf", version = "0.69.0" }
 
 futures = { workspace = true, optional = true, features = ["std"] }
 tokio = { workspace = true, optional = true, features = ["io-util"] }

diff --git a/noodles-bed/CHANGELOG.md b/noodles-bed/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.18.0 - 2024-12-12
+
+### Changed
+
+  * bed: Sync dependencies.
+
 ## 0.17.0 - 2024-09-26
 
 ### Changed

diff --git a/noodles-bed/Cargo.toml b/noodles-bed/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-bed"
-version = "0.17.0"
+version = "0.18.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -17,6 +17,6 @@ memchr.workspace = true
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
 
 [dev-dependencies]
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.40.0" }
-noodles-tabix = { path = "../noodles-tabix", version = "0.46.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.41.0" }
+noodles-tabix = { path = "../noodles-tabix", version = "0.47.0" }
diff --git a/noodles-bgzf/CHANGELOG.md b/noodles-bgzf/CHANGELOG.md
@@ -1,6 +1,6 @@
 # Changelog
 
-## Unreleased
+## 0.34.0 - 2024-12-12
 
 ### Added
 

diff --git a/noodles-bgzf/Cargo.toml b/noodles-bgzf/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-bgzf"
-version = "0.33.0"
+version = "0.34.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true

diff --git a/noodles-cram/CHANGELOG.md b/noodles-cram/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.72.0 - 2024-12-12
+
+### Changed
+
+  * cram: Sync dependencies.
+
 ## 0.71.0 - 2024-11-07
 
 ### Changed

diff --git a/noodles-cram/Cargo.toml b/noodles-cram/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-cram"
-version = "0.71.0"
+version = "0.72.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -23,10 +23,10 @@ bzip2 = "0.4.4"
 flate2.workspace = true
 indexmap.workspace = true
 md-5 = "0.10.0"
-noodles-bam = { path = "../noodles-bam", version = "0.70.0" }
+noodles-bam = { path = "../noodles-bam", version = "0.71.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
-noodles-fasta = { path = "../noodles-fasta", version = "0.45.0" }
-noodles-sam = { path = "../noodles-sam", version = "0.66.0" }
+noodles-fasta = { path = "../noodles-fasta", version = "0.46.0" }
+noodles-sam = { path = "../noodles-sam", version = "0.67.0" }
 xz2 = "0.1.6"
 
 async-compression = { version = "0.4.0", optional = true, features = ["gzip", "tokio"] }
@@ -37,7 +37,7 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }
 libdeflater = { workspace = true, optional = true }
 
 [dev-dependencies]
-noodles-sam = { path = "../noodles-sam", version = "0.66.0", features = ["async"] }
+noodles-sam = { path = "../noodles-sam", version = "0.67.0", features = ["async"] }
 tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] }
 
 [package.metadata.docs.rs]

diff --git a/noodles-csi/CHANGELOG.md b/noodles-csi/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.41.0 - 2024-12-12
+
+### Changed
+
+  * csi: Sync dependencies.
+
 ## 0.40.0 - 2024-11-07
 
 ### Changed

diff --git a/noodles-csi/Cargo.toml b/noodles-csi/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-csi"
-version = "0.40.0"
+version = "0.41.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -18,7 +18,7 @@ bstr.workspace = true
 bit-vec = "0.8.0"
 byteorder.workspace = true
 indexmap.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
 
 tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }

diff --git a/noodles-fasta/CHANGELOG.md b/noodles-fasta/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.46.0 - 2024-12-12
+
+### Changed
+
+  * fasta: Sync dependencies.
+
 ## 0.45.0 - 2024-10-22
 
 ### Added

diff --git a/noodles-fasta/Cargo.toml b/noodles-fasta/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-fasta"
-version = "0.45.0"
+version = "0.46.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -17,7 +17,7 @@ async = ["dep:tokio"]
 bstr.workspace = true
 bytes.workspace = true
 memchr.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
 
 tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }

diff --git a/noodles-gff/CHANGELOG.md b/noodles-gff/CHANGELOG.md
@@ -1,6 +1,6 @@
 # Changelog
 
-## Unreleased
+## 0.40.0 - 2024-12-12
 
 ### Added
 

diff --git a/noodles-gff/Cargo.toml b/noodles-gff/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-gff"
-version = "0.39.0"
+version = "0.40.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -15,9 +15,9 @@ async = ["dep:futures", "dep:tokio"]
 
 [dependencies]
 indexmap.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.40.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.41.0" }
 percent-encoding.workspace = true
 
 futures = { workspace = true, optional = true, features = ["std"] }

diff --git a/noodles-gtf/CHANGELOG.md b/noodles-gtf/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.35.0 - 2024-12-12
+
+### Changed
+
+  * gtf: Sync dependencies.
+
 ## 0.34.0 - 2024-11-07
 
 ### Changed

diff --git a/noodles-gtf/Cargo.toml b/noodles-gtf/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-gtf"
-version = "0.34.0"
+version = "0.35.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -11,6 +11,6 @@ repository = "https://github.com/zaeleus/noodles"
 documentation = "https://docs.rs/noodles-gtf"
 
 [dependencies]
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.40.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.41.0" }
diff --git a/noodles-sam/CHANGELOG.md b/noodles-sam/CHANGELOG.md
@@ -1,6 +1,6 @@
 # Changelog
 
-## Unreleased
+## 0.67.0 - 2024-12-12
 
 ### Changed
 

diff --git a/noodles-sam/Cargo.toml b/noodles-sam/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-sam"
-version = "0.66.0"
+version = "0.67.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -25,9 +25,9 @@ bstr.workspace = true
 indexmap.workspace = true
 lexical-core.workspace = true
 memchr.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.40.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.41.0" }
 
 futures = { workspace = true, optional = true, features = ["std"] }
 pin-project-lite = { workspace = true, optional = true }

diff --git a/noodles-tabix/CHANGELOG.md b/noodles-tabix/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.47.0 - 2024-12-12
+
+### Changed
+
+  * tabix: Sync dependencies.
+
 ## 0.46.0 - 2024-11-07
 
 ### Changed

diff --git a/noodles-tabix/Cargo.toml b/noodles-tabix/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-tabix"
-version = "0.46.0"
+version = "0.47.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -16,9 +16,9 @@ async = ["dep:tokio", "noodles-bgzf/async"]
 [dependencies]
 byteorder.workspace = true
 indexmap.workspace = true
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0" }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0" }
 noodles-core = { path = "../noodles-core", version = "0.15.0" }
-noodles-csi = { path = "../noodles-csi", version = "0.40.0" }
+noodles-csi = { path = "../noodles-csi", version = "0.41.0" }
 
 tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }
 

diff --git a/noodles-util/CHANGELOG.md b/noodles-util/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.56.0 - 2024-12-12
+
+### Changed
+
+  * util: Sync dependencies.
+
 ## 0.55.0 - 2024-11-07
 
 ### Changed

diff --git a/noodles-util/Cargo.toml b/noodles-util/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "noodles-util"
-version = "0.55.0"
+version = "0.56.0"
 authors = ["Michael Macias <[email protected]>"]
 license.workspace = true
 edition.workspace = true
@@ -40,15 +40,15 @@ variant = [
 
 [dependencies]
 flate2 = { workspace = true }
-noodles-bam = { path = "../noodles-bam", version = "0.70.0", optional = true }
-noodles-bcf = { path = "../noodles-bcf", version = "0.64.0", optional = true }
-noodles-bgzf = { path = "../noodles-bgzf", version = "0.33.0", optional = true }
+noodles-bam = { path = "../noodles-bam", version = "0.71.0", optional = true }
+noodles-bcf = { path = "../noodles-bcf", version = "0.65.0", optional = true }
+noodles-bgzf = { path = "../noodles-bgzf", version = "0.34.0", optional = true }
 noodles-core = { path = "../noodles-core", version = "0.15.0", optional = true }
-noodles-cram = { path = "../noodles-cram", version = "0.71.0", optional = true }
-noodles-csi = { path = "../noodles-csi", version = "0.40.0", optional = true }
-noodles-fasta = { path = "../noodles-fasta", version = "0.45.0", optional = true }
-noodles-sam = { path = "../noodles-sam", version = "0.66.0", optional = true }
-noodles-vcf = { path = "../noodles-vcf", version = "0.68.0", optional = true }
+noodles-cram = { path = "../noodles-cram", version = "0.72.0", optional = true }
+noodles-csi = { path = "../noodles-csi", version = "0.41.0", optional = true }
+noodles-fasta = { path = "../noodles-fasta", version = "0.46.0", optional = true }
+noodles-sam = { path = "../noodles-sam", version = "0.67.0", optional = true }
+noodles-vcf = { path = "../noodles-vcf", version = "0.69.0", optional = true }
 
 futures = { workspace = true, optional = true, features = ["std"] }
 tokio = { workspace = true, optional = true, features = ["fs", "io-util"] }

diff --git a/noodles-vcf/CHANGELOG.md b/noodles-vcf/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## 0.69.0 - 2024-12-12
+
+### Changed
+
+  * vcf: Sync dependencies.
+
 ## 0.68.0 - 2024-11-07
 
 ### Changed