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@zhanglab

Zhang Laboratory URI

Dr. Ying Zhang’s laboratory of Computational Molecular Ecology at the University of Rhode Island

Popular repositories Loading

  1. psamm psamm Public

    Curation and analysis of metabolic models

    Python 34 15

  2. psamm-model-collection psamm-model-collection Public

    Collection of PSAMM metabolic models converted from publicly available models

    7 8

  3. psamm-import psamm-import Public

    Import tool for PSAMM containing importers for SBML format and a number of published Excel formats

    Python 3 4

  4. GEM-iWP3 GEM-iWP3 Public

    Metabolic model of the Shewanella piezotolerans WP3

    1 1

  5. dl-toda dl-toda Public

    Python 1 1

  6. GEM-iPfu GEM-iPfu Public

    Jupyter Notebook 1

Repositories

Showing 10 of 16 repositories
  • dl-toda Public
    zhanglab/dl-toda’s past year of commit activity
    Python 1 GPL-3.0 1 0 1 Updated Dec 23, 2024
  • Foram_OA Public
    zhanglab/Foram_OA’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Dec 23, 2024
  • GEM-iPfu Public
    zhanglab/GEM-iPfu’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Nov 6, 2024
  • GEM-iCbes Public
    zhanglab/GEM-iCbes’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Sep 24, 2024
  • memonet Public
    zhanglab/memonet’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 7, 2023
  • psamm Public

    Curation and analysis of metabolic models

    zhanglab/psamm’s past year of commit activity
    Python 34 GPL-3.0 15 4 8 Updated Aug 8, 2023
  • ReadsClassification Public
    zhanglab/ReadsClassification’s past year of commit activity
    Python 0 0 0 0 Updated Sep 18, 2022
  • GEM-iWP2 Public
    zhanglab/GEM-iWP2’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Aug 16, 2022
  • psamm-tutorial Public

    Model files for the PSAMM tutorial

    zhanglab/psamm-tutorial’s past year of commit activity
    0 4 0 0 Updated May 11, 2022
  • psamm-model-collection Public

    Collection of PSAMM metabolic models converted from publicly available models

    zhanglab/psamm-model-collection’s past year of commit activity
    7 8 0 1 Updated Oct 31, 2020
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