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johnne committed Jun 1, 2020
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# contigtax
[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat-square)](http://bioconda.github.io/recipes/contigtax/README.html) ![dependencies](https://img.shields.io/conda/pn/bioconda/contigtax.svg) ![update history](https://img.shields.io/github/last-commit/NBISweden/contigtax/master.svg) ![CI](https://github.com/NBISweden/contigtax/workflows/CI/badge.svg?branch=master)
[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat-square)](http://bioconda.github.io/recipes/contigtax/README.html)
![dependencies](https://img.shields.io/conda/pn/bioconda/contigtax.svg)
![Docker](https://img.shields.io/docker/pulls/nbisweden/contigtax)
![update history](https://img.shields.io/github/last-commit/NBISweden/contigtax/master.svg)
![CI](https://github.com/NBISweden/contigtax/workflows/CI/badge.svg?branch=master)

contigtax is a tool that assigns taxonomy to metagenomic contigs by querying
contig nucleotide sequences against a protein database using `diamond blastx`
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