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@SENASICA-CNRPYC

SENASICA-CNRPYC

Secuenciación y Bioinformática

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  1. config config Public

    Shell

  2. backup backup Public

  3. utils utils Public

    Perl

  4. bin bin Public

    Python

  5. SeqSero SeqSero Public

    Forked from denglab/SeqSero

    Salmonella serotyping from genome sequencing data

    Python

  6. SalmID SalmID Public

    Forked from hcdenbakker/SalmID

    Rapid confirmation of Salmonella spp. and subspp. from sequence data

    Python

Repositories

Showing 10 of 18 repositories
  • plasmidID Public Forked from BU-ISCIII/plasmidID

    PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.

    SENASICA-CNRPYC/plasmidID’s past year of commit activity
    Shell 0 GPL-3.0 8 0 0 Updated Apr 23, 2019
  • srst2 Public Forked from katholt/srst2

    Short Read Sequence Typing for Bacterial Pathogens

    SENASICA-CNRPYC/srst2’s past year of commit activity
    Python 0 67 0 0 Updated Mar 25, 2019
  • MGmapper Public
    SENASICA-CNRPYC/MGmapper’s past year of commit activity
    Python 0 0 1 0 Updated Mar 22, 2019
  • dockers Public Forked from zorbax/dockers
    SENASICA-CNRPYC/dockers’s past year of commit activity
    Dockerfile 0 1 0 0 Updated Nov 6, 2018
  • ottotype Public Forked from zorbax/ottotype
    SENASICA-CNRPYC/ottotype’s past year of commit activity
    Shell 0 2 0 0 Updated Nov 6, 2018
  • FastViromeExplorer Public Forked from saima-tithi/FastViromeExplorer

    FastViromeExplorer project. Forked from https://code.vt.edu/saima5/FastViromeExplorer

    SENASICA-CNRPYC/FastViromeExplorer’s past year of commit activity
    Java 0 BSD-2-Clause 2 0 0 Updated Sep 24, 2018
  • qiime-deploy Public Forked from qiime/qiime-deploy

    Tool to easily install QIIME's dependencies on Linux systems

    SENASICA-CNRPYC/qiime-deploy’s past year of commit activity
    Python 0 32 0 0 Updated Aug 15, 2018
  • qiime-deploy-conf Public Forked from qiime/qiime-deploy-conf

    configuration files to be used with the qiime-deploy packages

    SENASICA-CNRPYC/qiime-deploy-conf’s past year of commit activity
    0 28 0 0 Updated Aug 15, 2018
  • KmerFinder Public
    SENASICA-CNRPYC/KmerFinder’s past year of commit activity
    Python 0 0 0 0 Updated Jul 4, 2018
  • WGS-Outbreaker Public Forked from BU-ISCIII/WGS-Outbreaker

    Pipeline for whole genome sequencing analysis for outbreak detection and characterization of foodborne bacteria

    SENASICA-CNRPYC/WGS-Outbreaker’s past year of commit activity
    Shell 0 2 0 0 Updated Apr 20, 2018
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