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AI.MED

AI.MED Laboratory at UAB

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  1. DEMA DEMA Public

    Java 1

  2. Polar-Gini-Curve Polar-Gini-Curve Public

    This is the source code for manucript Nguyen, T.M., Jeevan, J.J., Xu, N. and Chen, J.Y., 2021. Polar Gini Curve: a technique to discover gene expression spatial patterns from single-cell RNA-seq da…

    MATLAB 1

  3. biomedical-data-science biomedical-data-science Public

    This repository contains materials, case studies, and project overview discussed during INFO 703/603 course by Dr. Jake Chen at UAB

    1

  4. SEAS SEAS Public

    Statistical Enrichment Analysis of Samples (SEAS): a general-purpose tool to annotate metadata neighborhoods of biological samples

    HTML 1

  5. PAGER-Web-APP PAGER-Web-APP Public

    R

  6. WINNER WINNER Public

    This is the source code for manuscript: Nguyen, T. et al. Gene Prioritization in Network Biology with WINNER. The code rank the most important genes in a gene lists (seed genes) using their interac…

    MATLAB

Repositories

Showing 10 of 14 repositories
  • GeneTerrain-Web-APP Public
    aimed-lab/GeneTerrain-Web-APP’s past year of commit activity
    TypeScript 0 0 0 0 Updated Dec 3, 2024
  • mondrian-map Public
    aimed-lab/mondrian-map’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 20, 2024
  • Polar-Gini-Curve Public

    This is the source code for manucript Nguyen, T.M., Jeevan, J.J., Xu, N. and Chen, J.Y., 2021. Polar Gini Curve: a technique to discover gene expression spatial patterns from single-cell RNA-seq data. Genomics, Proteomics & Bioinformatics, 19(3), pp.493-503.

    aimed-lab/Polar-Gini-Curve’s past year of commit activity
    MATLAB 1 0 0 0 Updated Jul 12, 2023
  • WINNER Public

    This is the source code for manuscript: Nguyen, T. et al. Gene Prioritization in Network Biology with WINNER. The code rank the most important genes in a gene lists (seed genes) using their interactions, also expandable to non-seed (expanded) genes.

    aimed-lab/WINNER’s past year of commit activity
    MATLAB 0 0 0 0 Updated Feb 10, 2023
  • gene-prioritization Public

    Gene prioritization based on network biology tools

    aimed-lab/gene-prioritization’s past year of commit activity
    HTML 0 Apache-2.0 0 0 0 Updated Feb 7, 2023
  • biomedical-data-science Public

    This repository contains materials, case studies, and project overview discussed during INFO 703/603 course by Dr. Jake Chen at UAB

    aimed-lab/biomedical-data-science’s past year of commit activity
    1 MIT 0 0 0 Updated Jan 25, 2023
  • aimed-lab.github.io Public
    aimed-lab/aimed-lab.github.io’s past year of commit activity
    0 MIT 0 0 5 Updated Jan 24, 2023
  • SEAS Public

    Statistical Enrichment Analysis of Samples (SEAS): a general-purpose tool to annotate metadata neighborhoods of biological samples

    aimed-lab/SEAS’s past year of commit activity
    HTML 0 MIT 1 0 0 Updated Jul 29, 2022
  • HIP2 Public

    An online database of human plasma proteins from healthy individuals

    aimed-lab/HIP2’s past year of commit activity
    HTML 0 0 0 0 Updated Jul 25, 2022
  • ProteoLens Public

    A visual analytic tool for multi-scale database-driven biological network data mining

    aimed-lab/ProteoLens’s past year of commit activity
    0 0 0 0 Updated Jul 18, 2022
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