v16.39.0

Command-line tools

• Enhanced the --inputfile option in the virus summary and download commands to accept input for taxon names and TaxIDs, with a maximum limit of 100 entries.
  *Addressed an incorrect command syntax in the datasets command of the gene download summary endpoint.

Documentation updates

• Incorporated explanations for missing metadata in the reasons section for atypical genome assemblies.
• Updated the 'Using dataformat' documents to include descriptions of each field.

API documentation

• Fixed a bug by adding deprecated enumerations into the OpenAPI specification.

Gene reports

• The 'Refseq Select' and 'MANE Select' labels were added to the gene product report.
• Added a "locus tag" field to the gene report

Services

• Bug Fixes: Resolved a bug in file validation

v16.38.1

Virus

• Added support for providing a list of taxids and taxonomic names in POST requests to the virus summary and download endpoints

Gene

• Added a new link to the Multiple Comparative Genome Viewer to GET gene links.
• Added Gene Ontology information to the gene data report.

Documentaiton

• Added a new 'Using dataformat' section to the Datasets documentation page.

v16.37.0

Taxonomy services

• Bug Fix: Resolved an issue in the Taxonomy TSV report where column values were incorrectly mismatched.

Documentation

• Updated the Genome Notes definitions.

v16.36.0

Gene data report

• Resolved an issue where outdated RefSeqs from previous versions were being displayed.

Genome web page

• Fixed an issue where genome FTP links were displayed even when corresponding FTP files were unavailable.

Taxonomy services

• Updated retrieval logic to ensure only the latest taxonomy image is displayed.
• Added support for secondary taxonomy IDs in the taxonomy data report

Virus services

• Optimized the virus download service for faster and more efficient performance.

v16.35.2

Command-line tool

• Resolved a bug with the --fasta-filter flag.

v16.35.1

NCBI Datasets internal processing

This release focuses on internal processing improvements, enhancing system performance and reliability.

v16.35.0

Command-line tool

• Added support for --inputfile for taxon names and identifiers for the datasets summary and download genome commands.

API Documentation

Added a valid examples to the path parameters for all POST and GET requests.

Gene data report

Added the RefSeq summary to the gene data report.

v16.34.1

Taxonomy TSV report

• Resolved a bug that introduced a trailing newline and space in the Taxonomy TSV report.

v16.34.0

Documentation

• Added a new How-to for getting the underlying Nucleotide accessions for an Assembly accession
• Resolved a bug that hindered the prefill of the request body for POST endpoints.

Taxonomy data report

• Included a new column titled "Current Scientific Name is Formal" in the taxonomy TSV template.

v16.33.0

Data packages

• Added MD5 checksums for files referenced in fetch.txt within dehydrated download packages.

Gene data report

• Included gene location information for alternate and patch sequences.

Documentation

• Introduced a search functionality on the NCBI Datasets documentation pages for improved navigation.