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Pull requests: nf-core/modules

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Pull requests list

Added nf-tests to gprofile2/gost
#7265 opened Dec 27, 2024 by nschcolnicov Loading…
17 tasks
Add nftests to validatefomcomponents and staticdifferential
#7264 opened Dec 26, 2024 by nschcolnicov Loading…
17 tasks
Add new module decoupler/progeny
#7263 opened Dec 26, 2024 by atrigila • Draft
17 tasks
1
Added immunedeconv module
#7262 opened Dec 24, 2024 by nschcolnicov Loading…
17 tasks
PINTS Updates
#7261 opened Dec 23, 2024 by edmundmiller Loading…
@edmundmiller
Fix singularity oras images container-issue Ready for Review
#7260 opened Dec 21, 2024 by LeonHafner Loading…
17 tasks
@LeonHafner
1
CheckM2 module updates Ready for Review
#7259 opened Dec 21, 2024 by dialvarezs Loading…
2 of 17 tasks
1
modify custom/filterdifferentialtable to allow >=/<=
#7258 opened Dec 20, 2024 by suzannejin Loading…
15 of 17 tasks
added stub section and updated test
#7257 opened Dec 20, 2024 by MarieLataretu Loading…
4 of 5 tasks
1
Fix: arriba: rename argument and reorder alphabetically
#7255 opened Dec 20, 2024 by rannick Loading…
17 tasks
add subworkflow for functional enrichment analysis
#7254 opened Dec 20, 2024 by suzannejin • Draft
17 tasks
ADD CATPACK_DOWNLOAD
#7253 opened Dec 19, 2024 by jfy133 Loading…
17 tasks
1
10
New kma module new module Adding a new module WIP Work in progress
#7251 opened Dec 19, 2024 by Krannich479 Loading…
9 of 14 tasks
@Krannich479
14
Update Prokka to take compressed input && tidy module script Ready for Review
#7250 opened Dec 19, 2024 by prototaxites Loading…
5 of 17 tasks
2
Added BBMAP/REPAIR submodule Ready for Review update module
#7249 opened Dec 19, 2024 by mazzalab Loading…
14 tasks done
1
@mazzalab
7
READY FOR REVIEW: Adapt output declarations
#7244 opened Dec 18, 2024 by simoxb Loading…
13 tasks
2
Update gzrt to v0.9.1 container-issue Ready for Review update module
#7241 opened Dec 18, 2024 by mazzalab Loading…
12 tasks done
1
@mazzalab
6
chore(deps): update github actions
#7239 opened Dec 18, 2024 by renovate bot Loading…
2 tasks
1
Add functionality for --unknown-slide in spaceranger/count
#7233 opened Dec 17, 2024 by fasterius Loading…
1 task done
9
port mmseqs/tsv2exprofiledb to nf-test
#7232 opened Dec 17, 2024 by famosab Loading…
17 tasks
try porting mmseqs/search to nf-test
#7231 opened Dec 17, 2024 by famosab Loading…
17 tasks
5
added basicpy nftest
#7228 opened Dec 16, 2024 by kbestak Loading…
10 of 14 tasks
1
3
Move Changes action locally
#7223 opened Dec 13, 2024 by edmundmiller • Draft
@edmundmiller
4
DUMMY DELETE ME: Test if UNTAR fails on self_hosted runners
#7216 opened Dec 13, 2024 by jfy133 • Draft
17 tasks
Remove compressed flag from all mmseqs modules
#7211 opened Dec 12, 2024 by jasmezz Loading…
2 of 17 tasks
5
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