Repositories list

• navigate

  Public
  navigate - open source light-sheet microscope controls

  microscopylight-sheetlight-sheet-microcopy+ 1lightsheet

  Python

  •

  Other

  •7•33•37•1•Updated Dec 23, 2024Dec 23, 2024

• navigate-at-scale

  Public
  A navigate plugin for high-throughput microscopy.

  C

  •

  MIT License

  •1•1•4•1•Updated Nov 8, 2024Nov 8, 2024

• Intro-to-Python-2024

  Public
  Jupyter Notebook

  •0•2•0•0•Updated Oct 31, 2024Oct 31, 2024

• navigate-hardware

  Public
  Other

  •0•0•1•0•Updated Oct 9, 2024Oct 9, 2024

• navigate-photoactivation

  Public
  A plugin that enables event-driven photoactivation routines with navigate.

  Python

  •

  MIT License

  •0•0•0•0•Updated Sep 20, 2024Sep 20, 2024

• navigate-constant-velocity-acquisition

  Public
  A navigate plugin for constant velocity imaging.

  Python

  •

  MIT License

  •0•0•1•0•Updated Aug 30, 2024Aug 30, 2024

• navigate-confocal-projection

  Public
  Confocal Projection Plugin

  Python

  •

  MIT License

  •1•0•0•0•Updated Aug 30, 2024Aug 30, 2024

• navigate-mmcore-plugin

  Public
  A plugin for seamless integration of Micro-Manager devices with navigate, enhancing light-sheet microscopy control.

  microscopylight-sheet-microscopy

  Python

  •

  MIT License

  •1•0•0•0•Updated Aug 12, 2024Aug 12, 2024

• navigate-plugin-template

  Public template
  A forkable template for navigate plugins.

  pluginlight-sheet-microscopy

  Python

  •

  MIT License

  •2•0•0•0•Updated Aug 9, 2024Aug 9, 2024

• thedeanlab.github.io

  Public
  JavaScript

  •0•0•0•0•Updated May 10, 2024May 10, 2024

• navigate-ilastik-server

  Public
  Ilastik as a server for communication with the ASLM software.

  Python

  •0•0•0•0•Updated Apr 5, 2024Apr 5, 2024

• .github

  Public
  The Dean Lab at The University of Texas Southwestern Medical Center

  0•0•0•0•Updated Nov 12, 2023Nov 12, 2023

• CI2023

  Public
  Introduction to Python Software Development on GitHub

  Python

  •7•5•0•1•Updated Oct 26, 2023Oct 26, 2023

• GMIC

  Public
  Shell

  •0•0•0•0•Updated Feb 22, 2023Feb 22, 2023