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26 Open 61 Closed
26 Open 61 Closed
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Issues list

Allow to use a .txt file for email
#360 opened Dec 20, 2024 by svarona
.fastq file repeated in metadata
#359 opened Dec 20, 2024 by svarona
Review IonTorrent and Nanopore ontologies
#358 opened Dec 19, 2024 by svarona
@Aberdur
1
Incorporate collecting_institution enum values from an external JSON file
#355 opened Dec 12, 2024 by OPSergio
Sometimes rx_md5 fields are filled with null bug Something isn't working
#353 opened Dec 10, 2024 by Shettland
Longtable.json should be created in output-directory bug Something isn't working
#351 opened Dec 9, 2024 by Shettland
" Analysis date " duplicate label in the schema bug Something isn't working
#350 opened Dec 6, 2024 by luissian
Update read-bioinfo-metadata to include quality control checks enhancement New feature or request
#347 opened Nov 29, 2024 by Aberdur
@Aberdur
Add a github actions test for the wrapper
#346 opened Nov 29, 2024 by svarona
@Shettland
Wrapper fails to create excel files
#345 opened Nov 29, 2024 by svarona
@svarona
Corrupted samples aren't removed from samples_data_*.json
#344 opened Nov 29, 2024 by svarona
@svarona
duplicate md5 information in the schema bug Something isn't working
#337 opened Nov 26, 2024 by luissian
@Aberdur
Add relecov-tools version to log-file
#336 opened Nov 26, 2024 by svarona
2 of 5 tasks
@svarona
1
Request for access to the REGCESS database.
#326 opened Oct 9, 2024 by OPSergio
@OPSergio
bioinfo_config.json documentation documentation Improvements or additions to documentation
#307 opened Sep 13, 2024 by Shettland
@Daniel-VM
Add upload_database tests to github actions enhancement New feature or request
#297 opened Sep 2, 2024 by Shettland
@Shettland
Add Build Schema Test to GitHub Actions
#294 opened Aug 27, 2024 by Daniel-VM
@Daniel-VM
Lack of --log-file core functionality in module build-schema
#293 opened Aug 27, 2024 by Daniel-VM
@Aberdur
Include data_validation in template enhancement New feature or request
#291 opened Aug 23, 2024 by Shettland
@Aberdur
Enhance JSON Schema validation with custom validators for complex propertyIDs enhancement New feature or request
#271 opened Jun 18, 2024 by Daniel-VM
2 tasks
1
@Daniel-VM
Automatically send email of process log summary to the lab enhancement New feature or request
#268 opened May 24, 2024 by Shettland
@OPSergio
Read-bioinfo-metadata creates output even with no matching samples bug Something isn't working
#267 opened May 23, 2024 by Shettland
@albatalavera
Unique identifier for each sample bug Something isn't working
#254 opened Feb 29, 2024 by Shettland
@Shettland
1
New process to upload the results from bioinformatics analysis back to sftp enhancement New feature or request
#252 opened Feb 20, 2024 by Shettland
@luissian
Handle ENA API timeouts in upload-to-ena module bug Something isn't working
#241 opened Nov 23, 2023 by Shettland
@Aberdur
1
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